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Figtree is a program for viewing trees, including summary information produced by treeannotator, and producing publication quality figures. We have also created packages for each of the. Running beast for the first time this tutorial will guide you through running beast and some of its accessory programs to do a simple phylogenetic analysis

If you haven’t already, download. Installing beast beast has been developed in java, which allows the same code to run on any platform that has the java software installed Click copy and open the link in a new browser tab/window

To summarise bayes factor support for rates, select the discrete rates tab

Load the output beast file containing the spatial rates. To inform beauti/beast about the sampling dates of the sequences, go to the tips menu and select the “use tip dates” option By default all the taxa are assumed to have a date of zero.

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